Insertion junction: CLIP2.051316_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051316
Chromosome:chromosome 12
Location:8945574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545600 (1 of 4) IPR001841//IPR018957 - Zinc finger, RING-type // Zinc finger, C3HC4 RING-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCATCTGGGTCAAGGGTTGCGCGCGCCTGCGCTATCGGCTCCTCCCCA
Internal bar code:ACTGTAATTATGTGCAACTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2209
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCGTGTGAAAGGTGTTG
Suggested primer 2:GGCAGGTGGATTTGGGATGA