Insertion junction: CLIP2.051327_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051327
Chromosome:chromosome 11
Location:713463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467623 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGGGGAGAGGTTGGGTTGTGGCAGCCGGTTGCGGAATGGGGGTGGT
Internal bar code:CCCAATTGGCACATTTATCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1922
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCACCGATACCACCTGC
Suggested primer 2:AGCTATGTTCGGATGCCTGG