Insertion junction: CLIP2.051327_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051327
Chromosome:chromosome 11
Location:713485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467623 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCCAACCTCTCCCCTACAACCCCCAAACTCACCCGGCCTTGTGAAGT
Internal bar code:CCCAATTGGCACATTTATCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTATGTTCGGATGCCTGG
Suggested primer 2:TTTCCACCGATACCACCTGC