Insertion junction: CLIP2.051335_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051335
Chromosome:chromosome 10
Location:5958732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461250 NSF1 (1 of 1) K06027 - vesicle-fusing ATPase (NSF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCTCGCCTGTCACGTTGGCGCTGTTCCGCAGGTGACCATGGCGGACT
Internal bar code:CATACTACGTCTCTAGTAAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:905
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACACATGCACAAACACG
Suggested primer 2:CTCGCCACATCCTGGATCTC