Insertion junction: CLIP2.051336_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051336
Chromosome:chromosome 11
Location:3612036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478156 AP1B1 (1 of 1) K12392 - AP-1 complex subunit beta-1 (AP1B1); Beta1-Adaptin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGGAGTAAATCCTGCAGTGCCTGCACACCACACACGCACTGCCCCG
Internal bar code:AACACCTGTTTTTGCTTGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:52.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGTGGCACCAACCTAA
Suggested primer 2:GCTCATCACTCGACCACACA