Insertion junction: CLIP2.051342_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051342
Chromosome:chromosome 16
Location:5241107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684350 HAR1 (1 of 2) IPR006115//IPR008927//IPR029154 - 6-phosphogluconate dehydrogenase, NADP-binding // 6-phosphogluconate dehydrogenase C-terminal domain-like // 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain; Possible 3-hydroxyacid dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACCAAGGTGCGGGCACGGTTGAGCTTATCCGCAGTTGATGTCGCTGG
Internal bar code:CGAAATAATCTGAAAATTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3357
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCATTGCATCGCTCAC
Suggested primer 2:CGCTGCGTTGCTCAATCTAC