Insertion junction: CLIP2.051365_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051365
Chromosome:chromosome 13
Location:2926013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583500 TAF2,GEX2 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTACCGGTGTAACAACCTCAGACCCAGCGGGCGAGCTACCTCTTAAAA
Internal bar code:GGTTGATCAGCAAGCCTATAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2816
LEAP-Seq percent confirming:15.7895
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTTGAAAGGGATCAGCC
Suggested primer 2:GGACGGCTTCAGGAACATCA