Insertion junction: CLIP2.051365_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051365
Chromosome:chromosome 13
Location:2926050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583500 TAF2,GEX2 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTGCCCTGTGGACTCCAGAGCTGTTTGCGCTCTGCCGGGGAAACGC
Internal bar code:CGGCACCGGCATAGGGATTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGACGGCTTCAGGAACATCA
Suggested primer 2:AGGCTTGAAAGGGATCAGCC