Insertion junction: CLIP2.051377_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051377
Chromosome:chromosome 16
Location:1368874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651923 CRI1,CRTISO1 Carotenoid isomerase; (1 of 1) PTHR10668:SF5 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTACAACTCGTGGCTGCAACTTCTTCTGTCCTAATCATGAATGGCTA
Internal bar code:GCTAATTGTTAATCTGCTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1998
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATGTCGATGAAGCGGAG
Suggested primer 2:GTTTGCGTGTTTGCGTGTTG