Insertion junction: CLIP2.051379_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051379
Chromosome:chromosome 16
Location:971139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648750 (1 of 1) PF10373 - Est1 DNA/RNA binding domain (EST1_DNA_bind) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGTGGCCGTCCGATGCATGACGGCGGGGAGAAATGCAGTGCCGAAGT
Internal bar code:TCGAAGAGCGGACGGGTAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:744
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCCTCCATTCCCTACA
Suggested primer 2:GTGGAAGGCGGTGTTCTACA