Insertion junction: CLIP2.051386_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051386
Chromosome:chromosome 6
Location:7308839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299350 FBB15 Flagellar/basal body protein 15; (1 of 2) PF04819 - Family of unknown function (DUF716) (DUF716) 3'UTR
Cre06.g299450 3'UTR_intron
Cre06.g800733 (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCAATATCGCTTGTCAAGGCAGGCAAACTCGGCTGGAAACAGCGGAA
Internal bar code:CGTATTTGGTTTTTTACTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3820
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTGTACATGGTGGTGGA
Suggested primer 2:ACCGCTATGAGATGAAGCCG