Insertion junction: CLIP2.051391_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051391
Chromosome:chromosome 12
Location:2609209
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506350 HFO18 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS
Cre12.g506400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTGGAGAACGTCATCCGTGACTCGGTCACCTACACCGAGCACGCTC
Internal bar code:AGTTCGCGTCCGAGTGAATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2255
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAGGCTTCTGCTATGCG
Suggested primer 2:AAATCGTGGGCGGTTGTTTG