Insertion junction: CLIP2.051391_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051391
Chromosome:chromosome 12
Location:2609214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506350 HFO18 (1 of 33) K11254 - histone H4 (H4); Histone H4 CDS
Cre12.g506400 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACGGTGCGGGTCTCCTCGTAGATGAGGCCGCTGATACGTTTCACAC
Internal bar code:CAGCATGCCTTTTACTGACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3902
LEAP-Seq percent confirming:74.5763
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AAATCGTGGGCGGTTGTTTG
Suggested primer 2:TACGAGGCTTCTGCTATGCG