Insertion junction: CLIP2.051391_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051391
Chromosome:chromosome 13
Location:762734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566750 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCAATCTTGCCCTTCACGTCGACAGGCCGGCTACATGTGCCATGTGC
Internal bar code:CTATCCACTTACGCGTAAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1416
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCACCTGTTCCACGTTA
Suggested primer 2:CACGCATGCTACGTCTTTCG