Insertion junction: CLIP2.051392_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051392
Chromosome:chromosome 10
Location:3042974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440950 FAP192 (1 of 1) PTHR14465//PTHR14465:SF0 - IQ DOMAIN-CONTAINING PROTEIN H // IQ DOMAIN-CONTAINING PROTEIN H; Flagellar Associated Protein 192 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGTGTGCACACGCAGCGCAAGAGGCTGGGCCGTGTGGGGGTTGCAAG
Internal bar code:AACACATTGCTATTAATATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2145
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCACTTCCTCTCCACTC
Suggested primer 2:TAGGGGAGTGTAAGGGGAGC