Insertion junction: CLIP2.051401_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051401
Chromosome:chromosome 6
Location:5538409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286850 (1 of 1) 1.1.1.193 - 5-amino-6-(5-phosphoribosylamino)uracil reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAATAACTGGGATCAACCCTGCGTCAGCCCTTACTACCCTGCCTCA
Internal bar code:CCGGTGGTCCAGAATGCAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCGCTGAGCAATTCATG
Suggested primer 2:TTACCCTACCTGTCCTCCGG