Insertion junction: CLIP2.051406_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051406
Chromosome:chromosome 6
Location:267301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g250650 EZY8,DRP4A,DRP4 Similar to DRP4 (MX-like) class of Dynamin-like GTPases; (1 of 1) IPR000375//IPR001401//IPR020850//IPR022812//IPR023220//IPR027417//IPR030381 - Dynamin central domain // Dynamin, GTPase domain // GTPase effector domain, GED // Dynamin superfamily // Type IV secretion system, VirB5-domain // P-loop containing nucleoside triphosphate hydrolase // Dynamin-type guanine nucleotide-binding (G) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTTCCACGTCACGCATTGCAGGAGCTCATGAGAAATCTGTGGCGCAT
Internal bar code:GTTTTTGGGAGTTCTACGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3948
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGGTAGCAGCTGATCAG
Suggested primer 2:TCACCAAGCCCGACAAGATC