Insertion junction: CLIP2.051406_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051406
Chromosome:chromosome 6
Location:7849288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303483 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGACTTGAAGCAGGCGCCCCTGCTGCGCCTGAGGGCGAGTGCGAGGC
Internal bar code:GTTGATAGGCCTTCATGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1974
LEAP-Seq percent confirming:34.0909
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAGACTCAACTAGCGC
Suggested primer 2:CTGGGAGGAGCAGAAGCATC