Insertion junction: CLIP2.051416_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051416
Chromosome:chromosome 2
Location:5970360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118250 SWB1 SWIB domain-containing protein; (1 of 1) K15223 - upstream activation factor subunit UAF30 (UAF30, SPP27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGCTCATGCACACAGTGCCCGCGCATGCACCACGCGTTTCTCTCGA
Internal bar code:AGTATCCGAGTATCTCAAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2063
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAGAGGAGGAGGACGAC
Suggested primer 2:GATCCTGTGCTCGGTAGACG