Insertion junction: CLIP2.051422_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051422
Chromosome:chromosome 12
Location:9874329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543902 (1 of 1) 2.7.1.16 - Ribulokinase / L-ribulokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTGGGAATTAGGCGTGCTGGGTAAACGTTGTTTAGCGCGCCCAGGGT
Internal bar code:GATATAGTACGTTCTCCGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCGTGCCTTCCTCACTT
Suggested primer 2:CGCGACACATTTAAGGCTCG