Insertion junction: CLIP2.051430_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051430
Chromosome:chromosome 12
Location:8482327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549600 (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAGCCAAGCCCACGTGGGGGCAGGAAGGGGCAACGCTGGGACTTGGC
Internal bar code:AGTGGGCTTATAATCGGGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGGGAGGGAGAATGAGA
Suggested primer 2:CTTGTGTGCGTGTGTGTCAG