Insertion junction: CLIP2.051431_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051431
Chromosome:chromosome 2
Location:3763876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100800 (1 of 1) PTHR22847//PTHR22847:SF410 - WD40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 27 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAAGTGACCGGCTTATCGCCGCCGCCACCCGACCGCCCCGCCGCCAG
Internal bar code:CTTCCTTTACATCTGTTTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGACGGAGGCCTTCTTG
Suggested primer 2:GTGGGGTAGGTGTGTGTGAG