Insertion junction: CLIP2.051432_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051432
Chromosome:chromosome 17
Location:2374348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714150 KUP1 (1 of 5) K03549 - KUP system potassium uptake protein (kup); Potassium ion uptake transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTCGTCCCCATACACGGTGGAAACAACCCCCCCCCTACGCCGCCGC
Internal bar code:TCATTGAGCGCCACTGTTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1251
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATCGGTATCAAAACGCC
Suggested primer 2:GGTGTTGGATGGCTCACTCA