Insertion junction: CLIP2.051434_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051434
Chromosome:chromosome 1
Location:1710328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009450 DNJ22 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCAGGGCGGCATACCGGTCGCTGGCGAAGGCGTTCCACCCGGACGTC
Internal bar code:CTCTTTCAGTACCAGAAGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2150
LEAP-Seq percent confirming:86.1111
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCATGTGCGAACAACAA
Suggested primer 2:AGGTTCAGCTGCAGCATGAT