Insertion junction: CLIP2.051436_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051436
Chromosome:chromosome 1
Location:5121094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035800 IRK2 (1 of 2) PTHR11767//PTHR11767:SF47 - INWARD RECTIFIER POTASSIUM CHANNEL // SUBFAMILY NOT NAMED; Inwardly-rectifying potassium channel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCGGTGCCTGGTTTGTGGTCTTTGATGGCGGGCACAGCGTGGCAGGG
Internal bar code:GTACCTGTGCTGGGATCGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4239
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGCGTGGTGTGAGAGA
Suggested primer 2:AGTGGGTCAGATGCACTTCG