Insertion junction: CLIP2.051439_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051439
Chromosome:chromosome 6
Location:7119219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297904 (1 of 1) K10863 - aprataxin [EC:3.-.-.-] (APTX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCTCCCCAATGCTTATTTCCCATGCCCCAGGATTTCGACTCGCCGGC
Internal bar code:ATTAGACTAGTTACCAGGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4204
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAGTGGCGTCAGTGAAT
Suggested primer 2:TGGGTCGTTGCTTCTCAGTC