Insertion junction: CLIP2.051454_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051454
Chromosome:chromosome 11
Location:1997882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467768 (1 of 1) K10277 - lysine-specific demethylase 8 [EC:1.14.11.27] (KDM8, JMJD5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCGAAGACCTGTTTGGTCACTGCGTCCTGCACATGCTGCAGCGGT
Internal bar code:AGTGCGTCTTACATAAGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1950
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCCTACTTGGTCACCC
Suggested primer 2:ATTCTCACCCTTCCGGCAAG