Insertion junction: CLIP2.051466_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051466
Chromosome:chromosome 12
Location:2029321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510500 3'UTR
Cre12.g510550 (1 of 2) PTHR12197//PTHR12197:SF145 - SET AND MYND DOMAIN CONTAINING // SET DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTCAGCATGGTTGCGGATACTTCAAATAGCTAGTATGATATAGTTAG
Internal bar code:GTGATCGCTTAGTTGTACCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCATGACACCACTTGCTA
Suggested primer 2:CGATGTCAGTAGTCTCGCCC