Insertion junction: CLIP2.051486_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051486
Chromosome:chromosome 12
Location:2721775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504800 HTR16 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTCCGCGAGATTGCCCAGGACTTCAAGACCGACCTGCGCTTCCAGA
Internal bar code:TGGTTTGGCATGATTAAGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTGAGTGTTGGGTTTG
Suggested primer 2:CTCCGATCGTTCTCAGCCTC