Insertion junction: CLIP2.051489_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051489
Chromosome:chromosome 10
Location:2315081
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434400 PF6 (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t); Flagellar central pair-associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAAAACCCGCAGGGCGGCAGCTGCGCCTTCTACGAGTCCGAGCAGCT
Internal bar code:CAGCGGTCTGTGTTCTCGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGGTCCATGAGAGAGGG
Suggested primer 2:AGGACACGCTAAAGAAGGGC