Insertion junction: CLIP2.051489_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051489
Chromosome:chromosome 10
Location:2315122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434400 PF6 (1 of 1) K19090 - CRISPR-associated protein Cas5t (cas5t); Flagellar central pair-associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAGCATATGCATGAACGCCCCATGCAGAAAACTACAGGACTTGCCTG
Internal bar code:GAGAAGTCTGACGAATCCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2292
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACACGCTAAAGAAGGGC
Suggested primer 2:TCTGGGTCCATGAGAGAGGG