Insertion junction: CLIP2.051508_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051508
Chromosome:chromosome 4
Location:3937062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231124 (1 of 1) PF00397//PF00642 - WW domain (WW) // Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCAATGCGATTTCCAGCTCGGAGGCCACAGCTTCTCATGTTACTCG
Internal bar code:TTAAGGTGGCACTGTACCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1586
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTCCGGTGGTTGTGGAA
Suggested primer 2:TTTTGCCAACCTTCGCTTCG