Insertion junction: CLIP2.051509_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051509
Chromosome:chromosome 3
Location:5927368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188800 Nicotinate phosphoribosyltransferase; (1 of 1) PTHR11098//PTHR11098:SF2 - NICOTINATE PHOSPHORIBOSYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAACAGCAGCAGCAGCAGCTCGCCTAAGCCCCGCCACTCCCGCCTGC
Internal bar code:GTAGTCAGGCGCGGCGAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATCAATGGCCCAACCCC
Suggested primer 2:AGCCTCGGTACTTAGCCTCA