Insertion junction: CLIP2.051514_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051514
Chromosome:chromosome 3
Location:6718256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195950 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGATCCCGCGGGGGCGCGCTGACGCGCATGCGCTGCGAGAAGGTGCT
Internal bar code:AATCAGGCTAAGAAAAGGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4144
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACCTCAAGCTGCTCCAC
Suggested primer 2:TCAGTGCTTCTGATGCTGCA