Insertion junction: CLIP2.051533_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051533
Chromosome:chromosome 2
Location:4139489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103750 intron
lncRNA_TCONS_00041505 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGATTGAGTCACTAGGCTTGAGTTTATGCAGACACGCCCTGGCAACCG
Internal bar code:TGTGGCTATACGCGGACAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4202
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTATCCTTGCAACACCA
Suggested primer 2:GTTCCACTTTTCAGCGCGTT