Insertion junction: CLIP2.051538_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051538
Chromosome:chromosome 16
Location:1929082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656050 (1 of 26) IPR000209 - Peptidase S8/S53 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAATGTTTCATGTACCCGTACTGCAAGCAACGCCTATGTGCAGCTCCT
Internal bar code:TGGGTGTAATGGATGCCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:74
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGCCCATGTCCGGTTT
Suggested primer 2:GTGTTGTTTGGAGGCTGCAG