Insertion junction: CLIP2.051541_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051541
Chromosome:chromosome 4
Location:2926329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224600 (1 of 1) IPR000253//IPR011598 - Forkhead-associated (FHA) domain // Myc-type, basic helix-loop-helix (bHLH) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCTGACCCATGGCACCCTCTACGGCGCCCGCTTAGCCCACTGCTGC
Internal bar code:TCAACCTATAGAGGGTATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3498
LEAP-Seq percent confirming:93.2203
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:118

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCGCCACATCAAACATG
Suggested primer 2:ACCCATGACGTATCACAGCG