Insertion junction: CLIP2.051550_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051550
Chromosome:chromosome 3
Location:4735176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177550 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAGCAAAGAGAGGTTGGTACGGGCGGAGGCGCGGTGAATGATCTGT
Internal bar code:GCGTCTCCTGGGTGTGGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2757
LEAP-Seq percent confirming:57.4074
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACCTGACCGTGAACTGG
Suggested primer 2:GCTTTCGGGTGATGATGGGA