Insertion junction: CLIP2.051561_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051561
Chromosome:chromosome 2
Location:2236595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089900 SCM1,SCAMP5 (1 of 1) PTHR10687 - SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP; secretory carrier membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCGTCTACCGCTTCCTTAGCTACTCATGAATGCAACCCCCCGCCCG
Internal bar code:GAGCTGTATTTTGGCAGCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTACAACCCTCCCCTCCC
Suggested primer 2:CTGCTATGCATCAAACGCCC