Insertion junction: CLIP2.051561_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051561
Chromosome:chromosome 2
Location:2236599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089900 SCM1,SCAMP5 (1 of 1) PTHR10687 - SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP; secretory carrier membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGCGCGTGGGGCAGGGCGCTGGGAGCTGAGAGTGGAGCGCGGCATG
Internal bar code:CGTCACGAATGACGTGGCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1463
LEAP-Seq percent confirming:85.4545
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTATGCATCAAACGCCC
Suggested primer 2:ATCTACAACCCTCCCCTCCC