Insertion junction: CLIP2.051567_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.051567
Chromosome:chromosome 10
Location:6003796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801200 (1 of 6) PF02656 - Domain of unknown function (DUF202) (DUF202) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTCTTTGCCGGTGAGGCCGGTGGCTGGAGGCAACGGGAGGCTCCCCG
Internal bar code:CCAACTGGTTAGGCACTTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGAGCGAGGTGAACA
Suggested primer 2:CGATGCTACAGGTCTGGTGG