Insertion junction: CLIP2.051577_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051577
Chromosome:chromosome 2
Location:6625470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389750 (1 of 1) PTHR14677:SF2 - AN1-TYPE ZINC FINGER PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGCGCACGCTCTTGGCGCAGATTGGACACACTATCACTGTAGTCTC
Internal bar code:CGAGAATGTGCCACGACCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGGAGAGGTCGCCTTCT
Suggested primer 2:ACACGTACCTTGCACCTCTG