Insertion junction: CLIP2.051589_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051589
Chromosome:chromosome 16
Location:4600504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671000 NDA5 Type-II NADH dehydrogenase; (1 of 1) K17872 - NADH:ubiquinone reductase (non-electrogenic) (ndh2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACAACAAAACCGAGACCCACTCTTGCCCCACTGCTGCTGCCGCGCTCC
Internal bar code:GAGTACTGTCGTGACCGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:61.7647
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGGCACTTCACTTCAT
Suggested primer 2:CAACCACCCTCTCACCTCAC