Insertion junction: CLIP2.051591_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051591
Chromosome:chromosome 17
Location:673628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700500 (1 of 1) PTHR23196//PTHR23196:SF13 - PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAGCACCACATATCACACCACCATTCGGCACGCGGCCATGCCGCAGT
Internal bar code:GGCCAGGCGCACCCCGGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2849
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGCACTCCCAAACT
Suggested primer 2:GACAATTTACGGCGTCGCTC