Insertion junction: CLIP2.051603_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.051603
Chromosome:chromosome 17
Location:4495819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731250 uS15m,MRPS15 (1 of 1) K02956 - small subunit ribosomal protein S15 (RP-S15, MRPS15, rpsO); Mitochondrial ribosomal protein S15 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGTGACAAGCAGCAGCTCACACAGCGTCACGACGACTCGCTACTGC
Internal bar code:CAGTTGCACTCATGGTTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1749
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCACCAAGGCCTTCATGG
Suggested primer 2:ACGCAGCCTACCTAACAACC