Insertion junction: CLIP2.051612_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.051612
Chromosome:chromosome 11
Location:823529
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467639 (1 of 1) PF04910 - Transcriptional repressor TCF25 (Tcf25) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTCGTGGTTCCCACGAGTATCACTGCTCAGCGCCCCGCATGCAAGAC
Internal bar code:TTGACATCACTCTATAAATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6874
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGGGGTGTTGAGGGTC
Suggested primer 2:AGATTTAGCCCACAGCCCAC