Insertion junction: CLIP2.051612_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.051612
Chromosome:chromosome 12
Location:9419335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541250 NAR1E Putative nitrite transporter; (1 of 7) PTHR30520//PTHR30520:SF0 - FORMATE TRANSPORTER-RELATED // FORMATE TRANSPORTER 1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGCATACCCTCCCGCGGTCAAAGTCCCTGTGACTCCGCGCACAGTG
Internal bar code:GTAAACGTAAGACTGCCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1553
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCTGTTGGTTGTGCTG
Suggested primer 2:GCCCACGTCTACTGGAAACA