Insertion junction: CLIP2.051620_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.051620
Chromosome:chromosome 3
Location:5541470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185150 (1 of 11) IPR023109 - Integrase/recombinase, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTCCGTTCAACGCAGGAGCGCATGGAGAAGGTACTAGAAGCGGCACG
Internal bar code:CTCATGCAATACTGAGACTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3038
LEAP-Seq percent confirming:95.7447
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCACCAAACAACATGCA
Suggested primer 2:CACTGCCATCGCTAGAGGAG