Insertion junction: CLIP2.051622_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.051622
Chromosome:chromosome 3
Location:5903997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188750 HEL21 (1 of 1) K13177 - ATP-dependent RNA helicase DDX1 [EC:3.6.4.13] (DDX1); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGTCCGTGTATGTGGGGTATCAAACCCAAGCCGCAATCCTACAGGCA
Internal bar code:GCGTTTCTCTCACTAAATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1260
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCAACATGACCCTGCCC
Suggested primer 2:GCCACGACTGGAAAGGAAGA