Insertion junction: CLIP2.051623_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.051623
Chromosome:chromosome 3
Location:5237367
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182050 LCS1 (1 of 4) K01897 - long-chain acyl-CoA synthetase (ACSL, fadD); Long-chain acyl-CoA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGGCGTAAGCGTCTGTGTGGGCTGCCGCGTGGTACAGCAGCAGCAT
Internal bar code:AATAGGGACTTCAACCATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAGCAGAAGCAGTAA
Suggested primer 2:AGAAGATGGGCCCCTCTGAT